Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m55 family metallopeptidase | PC1_RS20550 | Not Available | Positive | 4647594 - 4648415 | 29697.4 |
| isoaspartyl peptidase/l-asparaginase family protein | PC1_RS20555 | Not Available | Positive | 4648475 - 4649422 | 32964.9 |
| lysr family transcriptional regulator | PC1_RS20560 | Not Available | Positive | 4649627 - 4650535 | 33432.8 |
| yicc/yloc family endoribonuclease | PC1_RS20565 | Not Available | Positive | 4650627 - 4651490 | 32917.5 |
| hypothetical protein | PC1_RS20570 | Not Available | Positive | 4651985 - 4652629 | 24397.9 |
| hypothetical protein | PC1_RS20575 | Not Available | Positive | 4652735 - 4652989 | 9767.88 |
| bro-n domain-containing protein | PC1_RS20580 | Not Available | Positive | 4653037 - 4653615 | 22103.3 |
| helix-turn-helix domain-containing protein | PC1_RS20585 | Not Available | Positive | 4653773 - 4654090 | 11687.1 |
| helix-turn-helix domain-containing protein | PC1_RS20590 | Not Available | Negative | 4654106 - 4654363 | 9471.46 |
| helix-turn-helix domain-containing protein | PC1_RS20595 | Not Available | Positive | 4654461 - 4654796 | 12419.0 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
