Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | PC1_RS20450 | Not Available | Positive | 4628037 - 4629284 | 45537.9 |
| glycosyltransferase family 2 protein | PC1_RS20455 | Not Available | Positive | 4629429 - 4630202 | 29644.9 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | PC1_RS20460 | Not Available | Positive | 4630287 - 4631564 | 47855.6 |
| pantetheine-phosphate adenylyltransferase | PC1_RS20465 | Not Available | Positive | 4631603 - 4632082 | 17602.2 |
| glycosyltransferase family 9 protein | PC1_RS20470 | Not Available | Negative | 4632091 - 4633065 | 36864.6 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | PC1_RS20475 | Not Available | Negative | 4633132 - 4633941 | 30231.2 |
| 50s ribosomal protein l33 | PC1_RS20480 | Not Available | Negative | 4634163 - 4634330 | 6343.88 |
| 50s ribosomal protein l28 | PC1_RS20485 | Not Available | Negative | 4634342 - 4634578 | 8946.97 |
| radc family protein | PC1_RS20490 | Not Available | Negative | 4634816 - 4635481 | 24831.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | PC1_RS20495 | Not Available | Positive | 4635668 - 4636912 | 44223.5 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
