Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent f420 reductase | PC1_RS20060 | Not Available | Positive | 4541095 - 4541721 | 22461.0 |
| ketol-acid reductoisomerase | PC1_RS20065 | Not Available | Negative | 4541841 - 4543319 | 53715.6 |
| hth-type transcriptional activator ilvy | PC1_RS20070 | Not Available | Positive | 4543505 - 4544395 | 33280.5 |
| lysozyme inhibitor lpri family protein | PC1_RS20075 | Not Available | Positive | 4544392 - 4545192 | 30083.2 |
| duf2461 domain-containing protein | PC1_RS20080 | Not Available | Negative | 4545211 - 4545954 | 29304.5 |
| lysozyme inhibitor lpri family protein | PC1_RS20085 | Not Available | Negative | 4546056 - 4546496 | 16988.5 |
| hypothetical protein | PC1_RS20090 | Not Available | Negative | 4546493 - 4547083 | 21817.3 |
| hcp family type vi secretion system effector | PC1_RS22085 | Not Available | Negative | 4547225 - 4547704 | 17552.8 |
| threonine ammonia-lyase, biosynthetic | PC1_RS20095 | Not Available | Negative | 4548254 - 4549798 | 56093.5 |
| dihydroxy-acid dehydratase | PC1_RS20100 | Not Available | Negative | 4549804 - 4551654 | 65551.2 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
