Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | PC1_RS19960 | Not Available | Negative | 4514448 - 4515197 | 28292.2 |
| eca oligosaccharide polymerase | PC1_RS19965 | Not Available | Negative | 4515194 - 4516585 | 52885.0 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | PC1_RS19970 | Not Available | Negative | 4516582 - 4517667 | 41292.8 |
| lipid iii flippase wzxe | PC1_RS19975 | Not Available | Negative | 4517664 - 4518914 | 45080.7 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | PC1_RS19980 | Not Available | Negative | 4518916 - 4520046 | 42105.6 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | PC1_RS19985 | Not Available | Negative | 4520051 - 4520782 | 26812.1 |
| dtdp-glucose 4,6-dehydratase | PC1_RS19990 | Not Available | Negative | 4520821 - 4521894 | 40105.2 |
| udp-n-acetyl-d-mannosamine dehydrogenase | PC1_RS19995 | Not Available | Negative | 4521885 - 4523147 | 45627.2 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | PC1_RS20000 | Not Available | Negative | 4523306 - 4524430 | 41813.3 |
| eca polysaccharide chain length modulation protein | PC1_RS20005 | Not Available | Negative | 4524501 - 4525547 | 39238.7 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
