Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase arok | PC1_RS19360 | Not Available | Negative | 4369330 - 4369851 | 19533.2 |
| dna uptake porin hofq | PC1_RS19365 | Not Available | Negative | 4370202 - 4371476 | 46124.5 |
| dna utilization family protein | PC1_RS19370 | Not Available | Negative | 4371556 - 4371933 | 13648.4 |
| hypothetical protein | PC1_RS19375 | Not Available | Negative | 4371930 - 4372517 | 21452.3 |
| piln domain-containing protein | PC1_RS19380 | Not Available | Negative | 4372510 - 4373079 | 22081.9 |
| type iv pilus biogenesis protein pilm | PC1_RS19385 | Not Available | Negative | 4373081 - 4373932 | 32258.8 |
| peptidoglycan glycosyltransferase/peptidoglycan dd-transpeptidase mrca | PC1_RS19390 | Not Available | Positive | 4374044 - 4376599 | 93045.9 |
| adp compounds hydrolase nude | PC1_RS19395 | Not Available | Negative | 4376685 - 4377242 | 21158.5 |
| intracellular growth attenuator family protein | PC1_RS19400 | Not Available | Positive | 4377679 - 4379826 | 79917.3 |
| gmp/imp nucleotidase | PC1_RS19405 | Not Available | Positive | 4379954 - 4380640 | 26324.1 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
