Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | PC1_RS18865 | Not Available | Positive | 4284612 - 4285160 | 19785.0 |
| duf1488 domain-containing protein | PC1_RS18870 | Not Available | Negative | 4285145 - 4285402 | 10111.7 |
| shikimate dehydrogenase | PC1_RS18875 | Not Available | Negative | 4285399 - 4286226 | 29639.7 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | PC1_RS18880 | Not Available | Negative | 4286246 - 4286815 | 20808.9 |
| topoisomerase dna-binding c4 zinc finger domain-containing protein | PC1_RS18885 | Not Available | Negative | 4286808 - 4287365 | 20597.9 |
| duf494 family protein smg | PC1_RS18890 | Not Available | Negative | 4287386 - 4287859 | 18512.1 |
| dna-protecting protein dpra | PC1_RS18895 | Not Available | Negative | 4287831 - 4288952 | 40675.0 |
| peptide deformylase | PC1_RS18900 | Not Available | Positive | 4289081 - 4289593 | 19518.7 |
| methionyl-trna formyltransferase | PC1_RS18905 | Not Available | Positive | 4289617 - 4290564 | 34165.3 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | PC1_RS18910 | Not Available | Positive | 4290631 - 4291920 | 48508.4 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
