Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate bypass operon transcriptional repressor iclr | PC1_RS18815 | Not Available | Positive | 4271229 - 4272059 | 29593.8 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | PC1_RS18820 | Not Available | Negative | 4272426 - 4274201 | 69252.9 |
| isocitrate lyase | PC1_RS18825 | Not Available | Negative | 4274251 - 4275558 | 47936.4 |
| malate synthase a | PC1_RS18830 | Not Available | Negative | 4275590 - 4277188 | 60761.7 |
| homoserine o-acetyltransferase meta | PC1_RS18835 | Not Available | Negative | 4277472 - 4278401 | 35530.4 |
| yjaa family stress response protein | PC1_RS18840 | Not Available | Negative | 4278538 - 4278903 | 13766.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4279002 - 4279117 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4279253 - 4282160 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 4282420 - 4282495 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4282582 - 4284123 | Not Available |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
