Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsh protease activity modulator hflk | PC1_RS18520 | Not Available | Negative | 4197156 - 4198418 | 45799.5 |
| ribosome rescue gtpase hflx | PC1_RS18525 | Not Available | Negative | 4198515 - 4199795 | 48313.0 |
| rna chaperone hfq | PC1_RS18530 | Not Available | Negative | 4199890 - 4200189 | 10834.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | PC1_RS18535 | Not Available | Negative | 4200301 - 4201242 | 35071.3 |
| dna mismatch repair endonuclease mutl | PC1_RS18540 | Not Available | Negative | 4201235 - 4203244 | 73813.9 |
| n-acetylmuramoyl-l-alanine amidase amib | PC1_RS18545 | Not Available | Negative | 4203296 - 4204969 | 59404.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | PC1_RS18550 | Not Available | Negative | 4204966 - 4205448 | 17428.8 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | PC1_RS18555 | Not Available | Negative | 4205486 - 4207030 | 54581.6 |
| hypothetical protein | PC1_RS18560 | Not Available | Negative | 4207123 - 4208007 | 32991.4 |
| trna epoxyqueuosine(34) reductase queg | PC1_RS18565 | Not Available | Positive | 4208175 - 4209314 | 43375.4 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
