Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel mscs | PC1_RS18420 | Not Available | Negative | 4174172 - 4175023 | 30570.3 |
| class ii fructose-bisphosphate aldolase | PC1_RS18425 | Not Available | Negative | 4175149 - 4176225 | 39076.3 |
| phosphoglycerate kinase | PC1_RS18430 | Not Available | Negative | 4176361 - 4177524 | 41187.7 |
| erythrose-4-phosphate dehydrogenase | PC1_RS18435 | Not Available | Negative | 4177597 - 4178613 | 37274.3 |
| transketolase | PC1_RS18440 | Not Available | Negative | 4178928 - 4180922 | 71666.7 |
| m48 family metallopeptidase | PC1_RS18445 | Not Available | Positive | 4181332 - 4182084 | 26790.6 |
| helix-turn-helix transcriptional regulator | PC1_RS18450 | Not Available | Positive | 4182763 - 4183308 | 20561.9 |
| biosynthetic arginine decarboxylase | PC1_RS18455 | Not Available | Negative | 4183488 - 4185470 | 74506.3 |
| methionine adenosyltransferase | PC1_RS18460 | Not Available | Positive | 4186188 - 4187339 | 41801.6 |
| sprt family zinc-dependent metalloprotease | PC1_RS18465 | Not Available | Positive | 4187463 - 4187975 | 19986.2 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
