Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-associated protein rapa | PC1_RS18075 | Not Available | Positive | 4094851 - 4097754 | 109753.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | PC1_RS18080 | Not Available | Positive | 4097922 - 4098575 | 24659.7 |
| co-chaperone djla | PC1_RS18085 | Not Available | Negative | 4098658 - 4099533 | 33081.2 |
| lps assembly protein lptd | PC1_RS18090 | Not Available | Positive | 4099719 - 4102082 | 89543.9 |
| peptidylprolyl isomerase sura | PC1_RS18095 | Not Available | Positive | 4102172 - 4103467 | 47535.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PC1_RS18100 | Not Available | Positive | 4103467 - 4104468 | 35464.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | PC1_RS18105 | Not Available | Positive | 4104461 - 4105279 | 30509.8 |
| co2+/mg2+ efflux protein apag | PC1_RS18110 | Not Available | Positive | 4105292 - 4105669 | 14070.7 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | PC1_RS18115 | Not Available | Positive | 4105672 - 4106517 | 31228.3 |
| hypothetical protein | PC1_RS18120 | Not Available | Negative | 4106556 - 4106750 | 6811.04 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
