Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PC1_RS17440 | Not Available | Positive | 3945028 - 3945666 | 23793.3 |
| amino acid permease | PC1_RS17445 | Not Available | Negative | 3945759 - 3947144 | 50063.7 |
| lrp/asnc family transcriptional regulator | PC1_RS17450 | Not Available | Positive | 3947504 - 3947983 | 17566.4 |
| yitt family protein | PC1_RS17455 | Not Available | Positive | 3948235 - 3948849 | 22239.0 |
| amino acid aminotransferase | PC1_RS17460 | Not Available | Positive | 3948914 - 3950107 | 43844.2 |
| m48 family metallopeptidase | PC1_RS17465 | Not Available | Positive | 3950191 - 3950694 | 19477.5 |
| hcp family type vi secretion system effector | PC1_RS17470 | Not Available | Positive | 3950812 - 3951291 | 17917.2 |
| duf1240 domain-containing protein | PC1_RS22035 | Not Available | Negative | 3951347 - 3951748 | 15050.6 |
| duf1240 domain-containing protein | PC1_RS17475 | Not Available | Negative | 3951806 - 3952210 | 15503.2 |
| duf1240 domain-containing protein | PC1_RS22040 | Not Available | Negative | 3952257 - 3952661 | 15439.0 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
