Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs family aminotransferase | PC1_RS22240 | Not Available | Negative | 3924677 - 3926623 | 69720.2 |
| degt/dnrj/eryc1/strs family aminotransferase | PC1_RS17345 | Not Available | Negative | 3926634 - 3927758 | 41697.8 |
| gfo/idh/moca family oxidoreductase | PC1_RS17350 | Not Available | Negative | 3927787 - 3928779 | 36514.0 |
| nudix hydrolase | PC1_RS17355 | Not Available | Negative | 3928776 - 3929336 | 21530.6 |
| helix-turn-helix domain-containing protein | PC1_RS17360 | Not Available | Negative | 3929831 - 3930412 | 20691.6 |
| dmt family transporter | PC1_RS17365 | Not Available | Positive | 3930547 - 3931503 | 33612.1 |
| diaminopimelate decarboxylase | PC1_RS17370 | Not Available | Negative | 3931500 - 3932762 | 45996.8 |
| lysr family transcriptional regulator | PC1_RS17375 | Not Available | Positive | 3932898 - 3933821 | 34105.5 |
| lysr family transcriptional regulator | PC1_RS17380 | Not Available | Negative | 3933855 - 3934763 | 33623.7 |
| mbl fold metallo-hydrolase | PC1_RS17385 | Not Available | Positive | 3934871 - 3935752 | 31820.2 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
