Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus twitching motility protein pilt | PC1_RS17195 | Not Available | Negative | 3896272 - 3897288 | 36916.4 |
| yggs family pyridoxal phosphate-dependent enzyme | PC1_RS17200 | Not Available | Positive | 3897310 - 3898023 | 25994.2 |
| pyrroline-5-carboxylate reductase | PC1_RS17205 | Not Available | Positive | 3898114 - 3898935 | 28698.6 |
| yggt family protein | PC1_RS17210 | Not Available | Positive | 3898984 - 3899538 | 20850.9 |
| duf167 family protein yggu | PC1_RS17215 | Not Available | Positive | 3899535 - 3899825 | 10607.0 |
| xtp/ditp diphosphatase | PC1_RS17220 | Not Available | Positive | 3899843 - 3900436 | 20869.8 |
| radical sam family heme chaperone hemw | PC1_RS17225 | Not Available | Positive | 3900429 - 3901571 | 42624.4 |
| type ii toxin-antitoxin system pard family antitoxin | PC1_RS22015 | Not Available | Positive | 3901797 - 3902060 | 10255.2 |
| type ii toxin-antitoxin system rele/pare family toxin | PC1_RS17230 | Not Available | Positive | 3902011 - 3902349 | 13093.8 |
| hepn domain-containing protein | PC1_RS17235 | Not Available | Negative | 3902499 - 3903425 | 35830.6 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
