Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-carbamoylputrescine amidase | PC1_RS00740 | Not Available | Positive | 181270 - 182154 | 32695.7 |
| agmatine deiminase | PC1_RS00745 | Not Available | Positive | 182158 - 183261 | 40744.1 |
| triose-phosphate isomerase | PC1_RS00750 | Not Available | Negative | 183401 - 184168 | 26790.0 |
| yiiq family protein | PC1_RS00755 | Not Available | Negative | 184334 - 184933 | 21960.3 |
| duf805 domain-containing protein | PC1_RS00760 | Not Available | Positive | 185131 - 185553 | 16250.2 |
| ferredoxin--nadp(+) reductase | PC1_RS00765 | Not Available | Negative | 185571 - 186317 | 27950.7 |
| class ii fructose-bisphosphatase | PC1_RS00770 | Not Available | Negative | 186435 - 187445 | 36038.9 |
| glycerol kinase glpk | PC1_RS00775 | Not Available | Negative | 187700 - 189211 | 55808.2 |
| mip/aquaporin family protein | PC1_RS00780 | Not Available | Negative | 189265 - 190104 | 29509.5 |
| septal ring assembly protein zapb | PC1_RS00785 | Not Available | Positive | 190801 - 191040 | 9131.89 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
