Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | PC1_RS16695 | Not Available | Positive | 3774598 - 3776316 | 63803.6 |
| rna polymerase sigma factor rpos | PC1_RS16700 | Not Available | Negative | 3776423 - 3777415 | 38088.1 |
| murein hydrolase activator nlpd | PC1_RS16705 | Not Available | Negative | 3777469 - 3778491 | 35213.1 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | PC1_RS16710 | Not Available | Negative | 3778975 - 3779601 | 23128.1 |
| trna pseudouridine(13) synthase trud | PC1_RS16715 | Not Available | Negative | 3779743 - 3780789 | 39036.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | PC1_RS16720 | Not Available | Negative | 3780907 - 3781404 | 17549.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | PC1_RS16725 | Not Available | Negative | 3781456 - 3782169 | 25766.8 |
| cell division protein ftsb | PC1_RS16730 | Not Available | Negative | 3782173 - 3782508 | 12574.9 |
| basic amino acid abc transporter substrate-binding protein | PC1_RS16735 | Not Available | Positive | 3782852 - 3783637 | 28474.0 |
| amino acid abc transporter permease | PC1_RS16740 | Not Available | Positive | 3783766 - 3784530 | 28341.1 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
