Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan meso-diaminopimelic acid protein amidase | PC1_RS16395 | Not Available | Positive | 3711978 - 3712712 | 27944.6 |
| class ii glutamine amidotransferase | PC1_RS16400 | Not Available | Negative | 3712683 - 3713450 | 28912.5 |
| d-sedoheptulose 7-phosphate isomerase | PC1_RS16405 | Not Available | Negative | 3713501 - 3714082 | 20790.8 |
| acyl-coa dehydrogenase fade | PC1_RS16410 | Not Available | Positive | 3714432 - 3716879 | 89341.7 |
| hnh nuclease yajd | PC1_RS16415 | Not Available | Positive | 3716978 - 3717328 | 13336.6 |
| s-methyl-5-thioribose kinase | PC1_RS16420 | Not Available | Negative | 3717394 - 3718596 | 44202.5 |
| s-methyl-5-thioribose-1-phosphate isomerase | PC1_RS16425 | Not Available | Positive | 3718749 - 3719777 | 36684.3 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | PC1_RS16430 | Not Available | Negative | 3720100 - 3720645 | 20632.1 |
| acireductone synthase | PC1_RS16435 | Not Available | Negative | 3720642 - 3721331 | 25824.2 |
| methylthioribulose 1-phosphate dehydratase | PC1_RS16440 | Not Available | Negative | 3721328 - 3721945 | 22686.1 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
