Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | PC1_RS16175 | Not Available | Negative | 3663977 - 3665314 | 49422.0 |
| type vi secretion system lipoprotein tssj | PC1_RS16180 | Not Available | Negative | 3665317 - 3665838 | 19383.0 |
| type vi secretion system-associated fha domain protein tagh | PC1_RS16185 | Not Available | Negative | 3665838 - 3667058 | 44936.8 |
| type vi secretion system baseplate subunit tssg | PC1_RS16190 | Not Available | Negative | 3667061 - 3668059 | 37607.8 |
| type vi secretion system baseplate subunit tssf | PC1_RS16195 | Not Available | Negative | 3668023 - 3669789 | 67078.2 |
| type vi secretion system baseplate subunit tsse | PC1_RS16200 | Not Available | Negative | 3669792 - 3670223 | 16327.3 |
| type vi secretion system contractile sheath large subunit | PC1_RS16205 | Not Available | Negative | 3670229 - 3671707 | 55178.6 |
| type vi secretion system contractile sheath small subunit | PC1_RS16210 | Not Available | Negative | 3671740 - 3672243 | 18549.3 |
| type iii-a crispr-associated protein cas10/csm1 | PC1_RS16215 | Not Available | Positive | 3673656 - 3676088 | 89890.6 |
| type iii-a crispr-associated protein csm2 | PC1_RS16220 | Not Available | Positive | 3676113 - 3676496 | 15042.1 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
