Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | PC1_RS15595 | Not Available | Negative | 3553929 - 3554717 | 29532.9 |
| Trna-asp | Not Available | Not Available | Positive | 3554938 - 3555014 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3555067 - 3555182 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3555318 - 3558225 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3558485 - 3558560 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3558647 - 3560186 | Not Available |
| atp-dependent chaperone clpb | PC1_RS15625 | Not Available | Negative | 3560680 - 3563253 | 95639.0 |
| purine nucleoside phosphorylase yfih | PC1_RS15630 | Not Available | Negative | 3563387 - 3564112 | 25870.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | PC1_RS15635 | Not Available | Negative | 3564156 - 3565133 | 36784.2 |
| outer membrane protein assembly factor bamd | PC1_RS15640 | Not Available | Positive | 3565268 - 3566002 | 27414.5 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
