Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoe | PC1_RS15250 | Not Available | Negative | 3484342 - 3484917 | 21752.9 |
| l-aspartate oxidase | PC1_RS15255 | Not Available | Positive | 3485278 - 3486879 | 59665.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | PC1_RS15260 | Not Available | Negative | 3486934 - 3487680 | 27883.3 |
| atp-dependent rna helicase srmb | PC1_RS15265 | Not Available | Positive | 3487815 - 3489140 | 49829.9 |
| autonomous glycyl radical cofactor grca | PC1_RS15270 | Not Available | Negative | 3489210 - 3489593 | 14459.2 |
| uracil-dna glycosylase | PC1_RS15275 | Not Available | Positive | 3489969 - 3490655 | 25525.4 |
| Trna-ala | Not Available | Not Available | Positive | 3490832 - 3490907 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3490957 - 3491032 | Not Available |
| alpha/beta hydrolase | PC1_RS15290 | Not Available | Positive | 3491300 - 3492169 | 31543.6 |
| glutamate--trna ligase | PC1_RS15295 | Not Available | Negative | 3492263 - 3493678 | 53364.0 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
