Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease-like cell division protein ftsx | PC1_RS00490 | Not Available | Positive | 124018 - 124986 | 35223.0 |
| rna polymerase sigma factor rpoh | PC1_RS00495 | Not Available | Positive | 125319 - 126176 | 32710.9 |
| aspartate 1-decarboxylase autocleavage activator panm | PC1_RS00500 | Not Available | Negative | 126260 - 126706 | 16951.6 |
| branched-chain amino acid abc transporter substrate-binding protein | PC1_RS00505 | Not Available | Positive | 127111 - 128223 | 39414.1 |
| high-affinity branched-chain amino acid abc transporter permease livh | PC1_RS00510 | Not Available | Positive | 128379 - 129305 | 32901.4 |
| high-affinity branched-chain amino acid abc transporter permease livm | PC1_RS00515 | Not Available | Positive | 129302 - 130576 | 46485.2 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | PC1_RS00520 | Not Available | Positive | 130573 - 131343 | 28209.6 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | PC1_RS00525 | Not Available | Positive | 131349 - 132050 | 25667.1 |
| plp-dependent aminotransferase family protein | PC1_RS00530 | Not Available | Positive | 132080 - 133270 | 44164.3 |
| methyl-accepting chemotaxis protein | PC1_RS00535 | Not Available | Negative | 133360 - 135006 | 59139.9 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
