Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i oxidase subunit cydx | PC1_RS21890 | Not Available | Positive | 3108552 - 3108656 | 3684.45 |
| yidh family protein | PC1_RS13605 | Not Available | Positive | 3108796 - 3109161 | 13541.8 |
| duf202 domain-containing protein | PC1_RS13610 | Not Available | Positive | 3109165 - 3109485 | 11728.7 |
| formate dehydrogenase accessory protein fdhe | PC1_RS13615 | Not Available | Negative | 3109574 - 3110503 | 34469.8 |
| plp-dependent aminotransferase family protein | PC1_RS13620 | Not Available | Negative | 3110739 - 3112190 | 53615.5 |
| glutamine amidotransferase | PC1_RS13625 | Not Available | Negative | 3112299 - 3113021 | 26577.6 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | PC1_RS13630 | Not Available | Negative | 3113248 - 3115677 | 86617.0 |
| ylac family protein | PC1_RS13635 | Not Available | Negative | 3116190 - 3116666 | 18590.5 |
| nad(p)h-binding protein | PC1_RS13640 | Not Available | Negative | 3116828 - 3117457 | 22232.8 |
| heme utilization cystosolic carrier protein hutx | PC1_RS13645 | Not Available | Negative | 3117454 - 3117954 | 18306.8 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
