Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | PC1_RS13350 | Not Available | Negative | 3053374 - 3054456 | 38244.6 |
| mipa/ompv family protein | PC1_RS13355 | Not Available | Negative | 3054483 - 3055298 | 29179.0 |
| response regulator transcription factor | PC1_RS13360 | Not Available | Positive | 3055452 - 3056141 | 25393.7 |
| sensor histidine kinase | PC1_RS13365 | Not Available | Positive | 3056147 - 3057346 | 45535.0 |
| transporter substrate-binding domain-containing protein | PC1_RS13370 | Not Available | Positive | 3057664 - 3058497 | 30934.0 |
| mmge/prpd family protein | PC1_RS13375 | Not Available | Negative | 3058533 - 3059942 | 50045.9 |
| amino acid abc transporter permease | PC1_RS13380 | Not Available | Positive | 3060093 - 3060770 | 25274.4 |
| amino acid abc transporter permease | PC1_RS13385 | Not Available | Positive | 3060779 - 3061444 | 25102.4 |
| amino acid abc transporter atp-binding protein | PC1_RS13390 | Not Available | Positive | 3061480 - 3062262 | 28732.9 |
| aminotransferase class iv | PC1_RS13395 | Not Available | Positive | 3062285 - 3063202 | 33632.0 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
