Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase ccmf/nrfe family subunit | PC1_RS12035 | Not Available | Negative | 2784387 - 2786261 | 68758.4 |
| cytochrome c nitrite reductase subunit nrfd | PC1_RS12040 | Not Available | Negative | 2786283 - 2787245 | 35531.7 |
| cytochrome c nitrite reductase fe-s protein | PC1_RS12045 | Not Available | Negative | 2787242 - 2787913 | 24678.9 |
| cytochrome c nitrite reductase pentaheme subunit | PC1_RS12050 | Not Available | Negative | 2787910 - 2788479 | 21219.4 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | PC1_RS12055 | Not Available | Negative | 2788528 - 2789901 | 50929.9 |
| esterase | PC1_RS12060 | Not Available | Negative | 2790547 - 2791713 | 42911.3 |
| sulfatase | PC1_RS12065 | Not Available | Negative | 2791911 - 2793605 | 64839.4 |
| anaerobic sulfatase maturase | PC1_RS12070 | Not Available | Positive | 2794108 - 2795325 | 46383.4 |
| carbohydrate porin | PC1_RS12075 | Not Available | Negative | 2795416 - 2797053 | 60506.0 |
| glycoside hydrolase family 1 protein | PC1_RS12080 | Not Available | Negative | 2797328 - 2798734 | 53561.4 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
