Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | PC1_RS11785 | Not Available | Negative | 2737899 - 2738582 | 26419.7 |
| mlic family protein | PC1_RS11790 | Not Available | Negative | 2738689 - 2739006 | 11587.0 |
| anhydro-n-acetylmuramic acid kinase | PC1_RS11795 | Not Available | Negative | 2739104 - 2740216 | 39509.0 |
| glycine zipper 2tm domain-containing protein | PC1_RS11800 | Not Available | Positive | 2740566 - 2741033 | 15444.5 |
| transcriptional regulator slya | PC1_RS11805 | Not Available | Negative | 2741165 - 2741602 | 16429.1 |
| duf1289 domain-containing protein | PC1_RS11810 | Not Available | Negative | 2741830 - 2742069 | 9228.97 |
| lactoylglutathione lyase | PC1_RS11815 | Not Available | Positive | 2742358 - 2742765 | 14820.5 |
| ribonuclease t | PC1_RS11820 | Not Available | Positive | 2742912 - 2743583 | 24383.9 |
| grx4 family monothiol glutaredoxin | PC1_RS11825 | Not Available | Negative | 2743697 - 2744047 | 13062.7 |
| c40 family peptidase | PC1_RS11830 | Not Available | Positive | 2744389 - 2745240 | 31552.1 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
