Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | PC1_RS22530 | Not Available | Positive | 55962 - 56087 | 4515.55 |
| sukh-3 domain-containing protein | PC1_RS00245 | Not Available | Negative | 56142 - 56579 | 16459.5 |
| rhs repeat-associated core domain-containing protein | PC1_RS00250 | Not Available | Negative | 56584 - 60897 | 161424.0 |
| duf1795 domain-containing protein | PC1_RS00255 | Not Available | Negative | 60909 - 61316 | 14948.9 |
| type vi secretion system tip protein vgrg | PC1_RS00260 | Not Available | Negative | 61325 - 63178 | 67969.6 |
| hcp family type vi secretion system effector | PC1_RS00265 | Not Available | Negative | 63269 - 63787 | 19108.6 |
| valine--pyruvate transaminase | PC1_RS00270 | Not Available | Negative | 64344 - 65594 | 46361.3 |
| aldose 1-epimerase family protein | PC1_RS00275 | Not Available | Positive | 65988 - 67196 | 44372.7 |
| o-acetylserine/cysteine exporter | PC1_RS00280 | Not Available | Positive | 67360 - 68271 | 32609.6 |
| tagaturonate reductase | PC1_RS00285 | Not Available | Negative | 68345 - 69790 | 54290.5 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
