Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | PC1_RS11060 | Not Available | Negative | 2558638 - 2559372 | 26318.4 |
| abc transporter permease | PC1_RS11065 | Not Available | Negative | 2559795 - 2560613 | 29507.2 |
| abc transporter permease | PC1_RS11070 | Not Available | Negative | 2560650 - 2561918 | 46776.7 |
| abc transporter substrate-binding protein | PC1_RS11075 | Not Available | Negative | 2561961 - 2562950 | 36342.9 |
| nad-dependent succinate-semialdehyde dehydrogenase | PC1_RS11085 | Not Available | Negative | 2563414 - 2564886 | 52805.6 |
| 4-aminobutyrate--2-oxoglutarate transaminase | PC1_RS11090 | Not Available | Negative | 2564897 - 2566162 | 45116.4 |
| plp-dependent aminotransferase family protein | PC1_RS11095 | Not Available | Positive | 2566316 - 2567809 | 55096.7 |
| abc transporter atp-binding protein | PC1_RS11100 | Not Available | Positive | 2568000 - 2569094 | 41239.9 |
| hypothetical protein | PC1_RS11110 | Not Available | Positive | 2569460 - 2570212 | 28404.9 |
| duf1800 domain-containing protein | PC1_RS11115 | Not Available | Positive | 2570325 - 2572286 | 73529.8 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
