Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system inner membrane ring lipoprotein sctj | PC1_RS10910 | Not Available | Negative | 2526698 - 2527465 | 28032.2 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | PC1_RS10915 | Not Available | Negative | 2527472 - 2527843 | 13101.2 |
| hrp pili protein hrpa | PC1_RS10920 | Not Available | Negative | 2527910 - 2528116 | 6841.06 |
| eal domain-containing protein | PC1_RS10925 | Not Available | Positive | 2528482 - 2530062 | 59034.4 |
| sigma 54-interacting transcriptional regulator | PC1_RS10930 | Not Available | Negative | 2530145 - 2531203 | 39411.6 |
| response regulator transcription factor | PC1_RS10935 | Not Available | Negative | 2531571 - 2532212 | 23413.8 |
| pas domain s-box protein | PC1_RS10940 | Not Available | Negative | 2532249 - 2533718 | 55868.1 |
| rna polymerase sigma factor | PC1_RS10945 | Not Available | Negative | 2533961 - 2534506 | 20783.0 |
| type iii secretion system gatekeeper subunit sctw | PC1_RS10950 | Not Available | Positive | 2534834 - 2536042 | 44109.4 |
| type iii secretion system export apparatus subunit sctv | PC1_RS10955 | Not Available | Positive | 2536039 - 2538141 | 77673.6 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
