Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4123 domain-containing protein | PC1_RS10860 | Not Available | Negative | 2517425 - 2518237 | 31460.0 |
| type vi secretion system tip protein vgrg | PC1_RS10865 | Not Available | Negative | 2518230 - 2520200 | 71888.3 |
| harpin hrpz family protein | PC1_RS10870 | Not Available | Negative | 2520676 - 2521758 | 35854.6 |
| hypothetical protein | PC1_RS10875 | Not Available | Negative | 2521904 - 2522251 | 12876.7 |
| hrpt family type iii secretion system protein | PC1_RS10880 | Not Available | Negative | 2522244 - 2522435 | 7002.43 |
| type iii secretion system outer membrane ring subunit sctc | PC1_RS10885 | Not Available | Negative | 2522585 - 2524654 | 75592.0 |
| type iii secretion system chaperone | PC1_RS10890 | Not Available | Negative | 2524647 - 2525081 | 15904.2 |
| type iii secretion protein hrpf | PC1_RS10895 | Not Available | Negative | 2525068 - 2525292 | 8039.38 |
| type iii secretion system stator protein sctl | PC1_RS10900 | Not Available | Negative | 2525433 - 2526032 | 22576.0 |
| hypothetical protein | PC1_RS10905 | Not Available | Negative | 2526069 - 2526701 | 23781.6 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
