Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| filamentous hemagglutinin n-terminal domain-containing protein | PC1_RS22590 | Not Available | Negative | 2499259 - 2504451 | 177933.0 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | PC1_RS10815 | Not Available | Negative | 2504502 - 2506166 | 62139.7 |
| gntr family transcriptional regulator | PC1_RS10820 | Not Available | Positive | 2506502 - 2507167 | 24805.1 |
| type iii secretion system chaperone | PC1_RS10825 | Not Available | Negative | 2507177 - 2507599 | 15534.0 |
| avre-family type 3 secretion system effector | PC1_RS10830 | Not Available | Negative | 2507635 - 2512518 | 173372.0 |
| pectate lyase | PC1_RS10835 | Not Available | Positive | 2512694 - 2514163 | 47305.1 |
| hypothetical protein | PC1_RS10840 | Not Available | Positive | 2514165 - 2514488 | 12047.2 |
| type vi secretion system paar protein | PC1_RS21825 | Not Available | Negative | 2514590 - 2514856 | 8445.95 |
| hypothetical protein | PC1_RS10850 | Not Available | Negative | 2514919 - 2515857 | 35727.9 |
| hypothetical protein | PC1_RS10855 | Not Available | Negative | 2515808 - 2517415 | 59694.4 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
