Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | PC1_RS10475 | Not Available | Negative | 2412177 - 2413706 | 54528.2 |
| duf1471 family protein ydgh | PC1_RS10480 | Not Available | Positive | 2414290 - 2415243 | 34287.9 |
| 3-deoxy-8-phosphooctulonate synthase | PC1_RS10485 | Not Available | Negative | 2415351 - 2416205 | 30915.5 |
| invasion regulator sirb1 | PC1_RS10490 | Not Available | Negative | 2416281 - 2417090 | 30623.8 |
| sirb2 family protein | PC1_RS10495 | Not Available | Negative | 2417093 - 2417494 | 15043.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | PC1_RS10500 | Not Available | Negative | 2417500 - 2418345 | 30589.3 |
| peptide chain release factor 1 | PC1_RS10505 | Not Available | Negative | 2418345 - 2419427 | 40370.5 |
| glutamyl-trna reductase | PC1_RS10510 | Not Available | Negative | 2419461 - 2420717 | 46319.6 |
| lipoprotein insertase outer membrane protein lolb | PC1_RS10515 | Not Available | Positive | 2420950 - 2421573 | 23742.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | PC1_RS10520 | Not Available | Positive | 2421577 - 2422449 | 31989.2 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
