Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb system transport protein tonb | PC1_RS09925 | Not Available | Positive | 2292263 - 2293021 | 27904.6 |
| acyl-coa thioester hydrolase ycia | PC1_RS09930 | Not Available | Negative | 2293151 - 2293573 | 15160.2 |
| septation protein a | PC1_RS09935 | Not Available | Negative | 2293678 - 2294244 | 21544.2 |
| ycic family protein | PC1_RS09940 | Not Available | Negative | 2294444 - 2295196 | 26767.2 |
| ykgj family cysteine cluster protein | PC1_RS09945 | Not Available | Negative | 2295255 - 2295659 | 14292.7 |
| outer membrane protein ompw | PC1_RS09950 | Not Available | Positive | 2295943 - 2296575 | 22925.4 |
| oligogalacturonate-specific porin kdgm family protein | PC1_RS09955 | Not Available | Negative | 2296703 - 2297431 | 27426.2 |
| tryptophan synthase subunit alpha | PC1_RS09960 | Not Available | Negative | 2297816 - 2298622 | 28831.6 |
| tryptophan synthase subunit beta | PC1_RS09965 | Not Available | Negative | 2298622 - 2299815 | 42991.8 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | PC1_RS09970 | Not Available | Negative | 2299829 - 2301196 | 49921.6 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
