Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter substrate-binding protein oppa | PC1_RS09880 | Not Available | Positive | 2281972 - 2283609 | 61380.5 |
| oligopeptide abc transporter permease oppb | PC1_RS09885 | Not Available | Positive | 2283664 - 2284584 | 33470.1 |
| oligopeptide abc transporter permease oppc | PC1_RS09890 | Not Available | Positive | 2284596 - 2285504 | 33245.1 |
| abc transporter atp-binding protein | PC1_RS09895 | Not Available | Positive | 2285516 - 2286511 | 36605.9 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppf | PC1_RS09900 | Not Available | Positive | 2286508 - 2287542 | 38436.9 |
| hi1450 family dsdna-mimic protein | PC1_RS09905 | Not Available | Negative | 2287614 - 2287937 | 12368.3 |
| cardiolipin synthase | PC1_RS09910 | Not Available | Negative | 2287994 - 2289454 | 55225.7 |
| yciy family protein | PC1_RS22340 | Not Available | Positive | 2289650 - 2289826 | 7490.12 |
| tar ligand binding domain-containing protein | PC1_RS09915 | Not Available | Negative | 2289913 - 2291586 | 61272.3 |
| ycii family protein | PC1_RS09920 | Not Available | Negative | 2291717 - 2292013 | 10677.6 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
