Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | PC1_RS09495 | Not Available | Negative | 2200684 - 2201574 | 33414.0 |
| pectate disaccharide-lyase pelw | PC1_RS09500 | Not Available | Negative | 2201622 - 2203253 | 62305.2 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | PC1_RS09505 | Not Available | Negative | 2203526 - 2204287 | 27250.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | PC1_RS09510 | Not Available | Negative | 2204369 - 2205205 | 31094.9 |
| cupin domain-containing protein | PC1_RS09515 | Not Available | Positive | 2205572 - 2205904 | 12489.0 |
| hexitol phosphatase hxpb | PC1_RS09520 | Not Available | Negative | 2206004 - 2206675 | 25103.4 |
| ynib family protein | PC1_RS09525 | Not Available | Positive | 2206965 - 2207513 | 20623.9 |
| fructosamine kinase family protein | PC1_RS09530 | Not Available | Negative | 2207593 - 2208453 | 33033.0 |
| metal abc transporter permease | PC1_RS09535 | Not Available | Negative | 2208724 - 2209581 | 30828.3 |
| metal abc transporter permease | PC1_RS09540 | Not Available | Negative | 2209578 - 2210441 | 30655.6 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
