Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic amino acid dmt transporter yddg | PC1_RS09445 | Not Available | Negative | 2190144 - 2191031 | 32205.8 |
| ammonia-dependent nad(+) synthetase | PC1_RS09450 | Not Available | Negative | 2191243 - 2192067 | 30279.9 |
| osmotically-inducible lipoprotein osme | PC1_RS09455 | Not Available | Positive | 2192294 - 2192626 | 11982.3 |
| l-cystine transporter | PC1_RS09460 | Not Available | Negative | 2192797 - 2194191 | 48912.2 |
| metal-dependent hydrolase | PC1_RS09465 | Not Available | Negative | 2194362 - 2194937 | 21567.6 |
| pectin acetylesterase paex | PC1_RS09470 | Not Available | Negative | 2195048 - 2196010 | 34623.7 |
| oligogalacturonate-specific porin kdgm family protein | PC1_RS09475 | Not Available | Negative | 2196363 - 2197091 | 27713.4 |
| abc transporter substrate-binding protein | PC1_RS09480 | Not Available | Negative | 2197340 - 2198629 | 48203.6 |
| abc transporter atp-binding protein | PC1_RS09485 | Not Available | Negative | 2198645 - 2199772 | 41907.1 |
| carbohydrate abc transporter permease | PC1_RS09490 | Not Available | Negative | 2199786 - 2200691 | 34268.5 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
