Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | PC1_RS09350 | Not Available | Positive | 2168233 - 2169978 | 64409.1 |
| lytr/algr family response regulator transcription factor | PC1_RS09355 | Not Available | Positive | 2169975 - 2170724 | 29175.2 |
| ofa family mfs transporter | PC1_RS09360 | Not Available | Positive | 2170909 - 2172132 | 43376.2 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | PC1_RS09365 | Not Available | Positive | 2172419 - 2173708 | 47938.9 |
| glycerophosphodiester phosphodiesterase family protein | PC1_RS09370 | Not Available | Positive | 2173739 - 2174587 | 30975.9 |
| protease htpx | PC1_RS09375 | Not Available | Positive | 2174754 - 2175635 | 32027.2 |
| oligogalacturonate lyase | PC1_RS09380 | Not Available | Positive | 2175977 - 2177143 | 44403.0 |
| dna-binding transcriptional regulator kdgr | PC1_RS09385 | Not Available | Positive | 2177358 - 2178149 | 29655.6 |
| yebo family protein | PC1_RS09390 | Not Available | Positive | 2178407 - 2178670 | 10016.3 |
| amino acid permease | PC1_RS09395 | Not Available | Positive | 2178798 - 2180198 | 50947.6 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
