Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein znua | PC1_RS09105 | Not Available | Positive | 2112345 - 2113364 | 37154.3 |
| murein dd-endopeptidase mepm | PC1_RS09110 | Not Available | Positive | 2113377 - 2114699 | 49258.8 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | PC1_RS09115 | Not Available | Positive | 2115079 - 2116050 | 37552.7 |
| pyruvate kinase | PC1_RS09120 | Not Available | Negative | 2116176 - 2117618 | 51582.7 |
| murr/rpir family transcriptional regulator | PC1_RS09125 | Not Available | Negative | 2117877 - 2118746 | 32222.8 |
| glucose-6-phosphate dehydrogenase | PC1_RS09130 | Not Available | Positive | 2119145 - 2120620 | 55990.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | PC1_RS09135 | Not Available | Positive | 2120789 - 2121430 | 22204.2 |
| formate-dependent phosphoribosylglycinamide formyltransferase | PC1_RS09140 | Not Available | Negative | 2121632 - 2122810 | 42285.8 |
| s9 family peptidase | PC1_RS09145 | Not Available | Positive | 2123010 - 2125061 | 79161.6 |
| dna polymerase iii subunit theta | PC1_RS09150 | Not Available | Negative | 2125424 - 2125654 | 9084.88 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
