Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | PC1_RS08715 | Not Available | Positive | 2017578 - 2018423 | 30469.5 |
| response regulator | PC1_RS08720 | Not Available | Negative | 2019043 - 2019744 | 26526.9 |
| sensor histidine kinase | PC1_RS08725 | Not Available | Negative | 2019851 - 2021455 | 59981.9 |
| 2-hydroxycarboxylate transporter family protein | PC1_RS08730 | Not Available | Positive | 2021885 - 2023255 | 48021.6 |
| fumarylacetoacetate hydrolase family protein | PC1_RS08735 | Not Available | Positive | 2023371 - 2024255 | 31870.8 |
| [citrate (pro-3s)-lyase] ligase | PC1_RS08740 | Not Available | Positive | 2024344 - 2025408 | 40245.4 |
| citrate lyase acyl carrier protein | PC1_RS08745 | Not Available | Positive | 2025432 - 2025722 | 10364.6 |
| citrate (pro-3s)-lyase subunit beta | PC1_RS08750 | Not Available | Positive | 2025722 - 2026597 | 32016.6 |
| citrate lyase subunit alpha | PC1_RS08755 | Not Available | Positive | 2026651 - 2028180 | 54988.0 |
| citrate lyase holo-[acyl-carrier protein] synthase | PC1_RS08760 | Not Available | Positive | 2028206 - 2028733 | 19424.3 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
