Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase/oxoprolinase n-terminal domain-containing protein | PC1_RS08620 | Not Available | Positive | 1993775 - 1995343 | 56230.5 |
| pyruvate formate lyase 1-activating protein | PC1_RS08625 | Not Available | Negative | 1995432 - 1996172 | 28130.7 |
| formate c-acetyltransferase | PC1_RS08630 | Not Available | Negative | 1996442 - 1998724 | 84945.3 |
| formate transporter foca | PC1_RS08635 | Not Available | Negative | 1998782 - 1999642 | 30931.5 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | PC1_RS08640 | Not Available | Negative | 2000094 - 2001857 | 65704.9 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | PC1_RS08645 | Not Available | Positive | 2002186 - 2003271 | 40148.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | PC1_RS08650 | Not Available | Positive | 2003353 - 2004642 | 46603.0 |
| (d)cmp kinase | PC1_RS08655 | Not Available | Positive | 2004865 - 2005542 | 24439.4 |
| 30s ribosomal protein s1 | PC1_RS08660 | Not Available | Positive | 2005658 - 2007331 | 61239.7 |
| integration host factor subunit beta | PC1_RS08665 | Not Available | Positive | 2007423 - 2007707 | 10581.7 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
