Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxylamine reductase | PC1_RS08520 | Not Available | Negative | 1966347 - 1967999 | 60081.2 |
| lysine exporter lyso family protein | PC1_RS08525 | Not Available | Negative | 1968188 - 1969087 | 32396.0 |
| atp-dependent endonuclease | PC1_RS08530 | Not Available | Positive | 1969400 - 1971064 | 63415.5 |
| cold shock-like protein cspd | PC1_RS08535 | Not Available | Negative | 1971178 - 1971399 | 7916.37 |
| atp-dependent clp protease adapter clps | PC1_RS08540 | Not Available | Positive | 1971821 - 1972141 | 12164.4 |
| atp-dependent clp protease atp-binding subunit clpa | PC1_RS08545 | Not Available | Positive | 1972171 - 1974444 | 84161.8 |
| translation initiation factor if-1 | PC1_RS08550 | Not Available | Negative | 1974605 - 1974823 | 8236.07 |
| leucyl/phenylalanyl-trna--protein transferase | PC1_RS08555 | Not Available | Negative | 1974937 - 1975641 | 26427.3 |
| heme abc transporter atp-binding protein/permease cydc | PC1_RS08560 | Not Available | Negative | 1975676 - 1977415 | 63669.5 |
| heme abc transporter permease/atp-binding protein cydd | PC1_RS08565 | Not Available | Negative | 1977415 - 1979181 | 64774.1 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
