Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| his-xaa-ser system radical sam maturase hxsc | PC1_RS08065 | Not Available | Positive | 1867012 - 1868124 | 41485.1 |
| his-xaa-ser repeat protein hxsa | PC1_RS21725 | Not Available | Positive | 1868121 - 1868777 | 23187.8 |
| duf6119 family protein | PC1_RS08070 | Not Available | Positive | 1868799 - 1870418 | 63312.6 |
| hypothetical protein | PC1_RS08075 | Not Available | Negative | 1870518 - 1870697 | 7110.49 |
| hypothetical protein | PC1_RS08080 | Not Available | Positive | 1870941 - 1871135 | 7257.75 |
| duf6998 domain-containing protein | PC1_RS08085 | Not Available | Positive | 1871202 - 1871678 | 17237.9 |
| hypothetical protein | PC1_RS08090 | Not Available | Negative | 1871925 - 1872821 | 35422.4 |
| tir domain-containing protein | PC1_RS08095 | Not Available | Negative | 1872977 - 1873969 | 37028.3 |
| hcp family type vi secretion system effector | PC1_RS08100 | Not Available | Positive | 1874406 - 1874891 | 18115.8 |
| restriction endonuclease | PC1_RS08105 | Not Available | Positive | 1875253 - 1876137 | 34413.3 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
