Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | PC1_RS07920 | Not Available | Positive | 1839633 - 1840184 | 22035.3 |
| threonine/homoserine exporter rhta | PC1_RS07925 | Not Available | Negative | 1840172 - 1841059 | 31051.1 |
| outer membrane protein ompx | PC1_RS07930 | Not Available | Positive | 1841436 - 1841951 | 18166.0 |
| mfs transporter | PC1_RS07935 | Not Available | Positive | 1842295 - 1843464 | 41386.3 |
| emmdr/yeeo family multidrug/toxin efflux mate transporter | PC1_RS07940 | Not Available | Negative | 1843503 - 1844909 | 51044.8 |
| rhodanese family protein | PC1_RS07945 | Not Available | Positive | 1845316 - 1845852 | 19129.5 |
| dhcw motif cupin fold protein | PC1_RS07950 | Not Available | Positive | 1845918 - 1846247 | 12547.8 |
| gyri-like domain-containing protein | PC1_RS07955 | Not Available | Positive | 1846482 - 1846946 | 17371.3 |
| hypothetical protein | PC1_RS07960 | Not Available | Negative | 1847106 - 1847984 | 31342.6 |
| hypothetical protein | PC1_RS22655 | Not Available | Negative | 1848600 - 1848725 | 4502.31 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
