Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | PC1_RS07310 | Not Available | Positive | 1712418 - 1712900 | 17805.6 |
| duf2058 domain-containing protein | PC1_RS07315 | Not Available | Positive | 1713079 - 1713618 | 20159.2 |
| methionine synthase | PC1_RS07320 | Not Available | Negative | 1713734 - 1714765 | 38595.4 |
| duf1852 domain-containing protein | PC1_RS07325 | Not Available | Negative | 1714796 - 1715773 | 37525.6 |
| ymja family protein | PC1_RS07330 | Not Available | Positive | 1716231 - 1716476 | 9420.82 |
| gamma-glutamylcyclotransferase family protein | PC1_RS07335 | Not Available | Negative | 1716648 - 1716983 | 12362.4 |
| tyrosine--trna ligase | PC1_RS07340 | Not Available | Positive | 1717298 - 1718500 | 45005.5 |
| oxidoreductase | PC1_RS07345 | Not Available | Positive | 1718624 - 1719514 | 31565.9 |
| lysr family transcriptional regulator | PC1_RS07350 | Not Available | Negative | 1719667 - 1720542 | 33254.4 |
| cysteine/o-acetylserine transporter | PC1_RS07355 | Not Available | Positive | 1720652 - 1721239 | 21581.0 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
