Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-acylating methylmalonate-semialdehyde dehydrogenase | PC1_RS06685 | Not Available | Positive | 1552882 - 1554393 | 54231.1 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | PC1_RS06690 | Not Available | Positive | 1554823 - 1556754 | 70498.1 |
| inositol 2-dehydrogenase | PC1_RS06695 | Not Available | Positive | 1557518 - 1558504 | 35903.8 |
| substrate-binding domain-containing protein | PC1_RS06700 | Not Available | Positive | 1558584 - 1559522 | 33003.6 |
| sugar abc transporter atp-binding protein | PC1_RS06705 | Not Available | Positive | 1559589 - 1561136 | 56357.2 |
| abc transporter permease | PC1_RS06710 | Not Available | Positive | 1561149 - 1562180 | 36643.8 |
| gfo/idh/moca family protein | PC1_RS06715 | Not Available | Positive | 1562221 - 1563354 | 40988.9 |
| bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolase | PC1_RS06720 | Not Available | Positive | 1563401 - 1565305 | 70346.7 |
| myo-inosose-2 dehydratase | PC1_RS06725 | Not Available | Positive | 1565340 - 1566230 | 32637.8 |
| 5-deoxy-glucuronate isomerase | PC1_RS06730 | Not Available | Positive | 1566318 - 1567154 | 31384.5 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
