Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase e1 component | PC1_RS06195 | Not Available | Positive | 1442586 - 1445393 | 105480.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | PC1_RS06200 | Not Available | Positive | 1445409 - 1446632 | 44368.4 |
| adp-forming succinate--coa ligase subunit beta | PC1_RS06205 | Not Available | Positive | 1446831 - 1447997 | 41199.7 |
| succinate--coa ligase subunit alpha | PC1_RS06210 | Not Available | Positive | 1447997 - 1448869 | 29766.2 |
| yfap family protein | PC1_RS06215 | Not Available | Positive | 1449122 - 1450267 | 41332.7 |
| cytochrome ubiquinol oxidase subunit i | PC1_RS06220 | Not Available | Positive | 1450992 - 1452560 | 58176.5 |
| cytochrome d ubiquinol oxidase subunit ii | PC1_RS06225 | Not Available | Positive | 1452574 - 1453713 | 42103.3 |
| cytochrome bd-i oxidase subunit cydx | PC1_RS21660 | Not Available | Positive | 1453730 - 1453846 | 4173.02 |
| cyd operon protein ybge | PC1_RS06230 | Not Available | Positive | 1453843 - 1454136 | 10947.7 |
| tol-pal system-associated acyl-coa thioesterase | PC1_RS06235 | Not Available | Positive | 1454270 - 1454674 | 15359.5 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
