Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase subunit pxpb | PC1_RS06145 | Not Available | Positive | 1433144 - 1433800 | 24109.0 |
| 5-oxoprolinase subunit pxpc | PC1_RS06150 | Not Available | Positive | 1433794 - 1434738 | 34616.7 |
| 5-oxoprolinase subunit pxpa | PC1_RS06155 | Not Available | Positive | 1434728 - 1435465 | 26113.5 |
| pyroglutamyl-peptidase i | PC1_RS06160 | Not Available | Positive | 1435496 - 1436143 | 23061.8 |
| endonuclease viii | PC1_RS06165 | Not Available | Positive | 1436194 - 1436985 | 30273.4 |
| citrate synthase | PC1_RS06170 | Not Available | Negative | 1437158 - 1438444 | 48343.0 |
| succinate dehydrogenase cytochrome b556 subunit | PC1_RS06175 | Not Available | Positive | 1439098 - 1439487 | 14094.7 |
| succinate dehydrogenase membrane anchor subunit | PC1_RS06180 | Not Available | Positive | 1439481 - 1439828 | 12832.3 |
| succinate dehydrogenase flavoprotein subunit | PC1_RS06185 | Not Available | Positive | 1439828 - 1441594 | 64431.5 |
| succinate dehydrogenase iron-sulfur subunit | PC1_RS06190 | Not Available | Positive | 1441611 - 1442327 | 26767.4 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
