Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein ybba | PC1_RS05595 | Not Available | Positive | 1313970 - 1314701 | 26246.4 |
| putative abc transporter permease subunit ybbp | PC1_RS05600 | Not Available | Positive | 1314698 - 1317127 | 90021.4 |
| spermidine n1-acetyltransferase | PC1_RS05605 | Not Available | Negative | 1317525 - 1318100 | 22175.3 |
| tonb-dependent siderophore receptor | PC1_RS05610 | Not Available | Negative | 1318267 - 1320393 | 78239.7 |
| abc transporter substrate-binding protein | PC1_RS05615 | Not Available | Negative | 1320386 - 1321492 | 41406.3 |
| phosphoribosylglycinamide formyltransferase | PC1_RS05620 | Not Available | Negative | 1321786 - 1322424 | 23462.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | PC1_RS05625 | Not Available | Negative | 1322424 - 1323461 | 36827.1 |
| uracil phosphoribosyltransferase | PC1_RS05630 | Not Available | Positive | 1323799 - 1324425 | 22525.8 |
| uracil permease | PC1_RS05635 | Not Available | Positive | 1324654 - 1325943 | 44957.7 |
| dnaa inactivator hda | PC1_RS05640 | Not Available | Positive | 1326043 - 1326750 | 26822.2 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
