Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | PC1_RS05105 | Not Available | Positive | 1196772 - 1197908 | 41137.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | PC1_RS05110 | Not Available | Positive | 1198019 - 1198495 | 16481.9 |
| transcription antitermination factor nusb | PC1_RS05115 | Not Available | Positive | 1198520 - 1198939 | 15720.0 |
| thiamine-phosphate kinase | PC1_RS05120 | Not Available | Positive | 1199008 - 1199988 | 35443.9 |
| phosphatidylglycerophosphatase a | PC1_RS05125 | Not Available | Positive | 1199963 - 1200499 | 19971.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | PC1_RS05130 | Not Available | Negative | 1200585 - 1202450 | 67732.4 |
| (2e,6e)-farnesyl diphosphate synthase | PC1_RS05135 | Not Available | Negative | 1202468 - 1203379 | 32522.8 |
| exodeoxyribonuclease vii small subunit | PC1_RS05140 | Not Available | Negative | 1203376 - 1203624 | 9199.73 |
| trna uracil 4-sulfurtransferase thii | PC1_RS05145 | Not Available | Positive | 1203877 - 1205325 | 54806.1 |
| protein deglycase yajl | PC1_RS05150 | Not Available | Negative | 1205393 - 1205983 | 20967.7 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
