Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | PC1_RS05055 | Not Available | Negative | 1186599 - 1187873 | 47333.6 |
| peroxiredoxin c | PC1_RS05060 | Not Available | Negative | 1188099 - 1188701 | 22174.5 |
| acp phosphodiesterase | PC1_RS05065 | Not Available | Negative | 1189040 - 1189621 | 22828.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | PC1_RS05070 | Not Available | Positive | 1189813 - 1190880 | 39253.8 |
| trna guanosine(34) transglycosylase tgt | PC1_RS05075 | Not Available | Positive | 1190978 - 1192123 | 43421.1 |
| preprotein translocase subunit yajc | PC1_RS05080 | Not Available | Positive | 1192232 - 1192564 | 11828.7 |
| protein translocase subunit secd | PC1_RS05085 | Not Available | Positive | 1192592 - 1194439 | 66848.3 |
| protein translocase subunit secf | PC1_RS05090 | Not Available | Positive | 1194513 - 1195424 | 32909.8 |
| duf3251 domain-containing protein | PC1_RS05095 | Not Available | Negative | 1195500 - 1196069 | 20463.7 |
| transcriptional regulator nrdr | PC1_RS05100 | Not Available | Positive | 1196287 - 1196736 | 17230.9 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
