Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siab family protein kinase | PC1_RS04905 | Not Available | Negative | 1131190 - 1131744 | 20777.0 |
| spoiie family protein phosphatase | PC1_RS04910 | Not Available | Negative | 1131758 - 1133002 | 46771.1 |
| alpha/beta hydrolase | PC1_RS04915 | Not Available | Negative | 1133088 - 1134281 | 44877.4 |
| fcd domain-containing protein | PC1_RS04920 | Not Available | Positive | 1134493 - 1135227 | 27935.2 |
| mannonate dehydratase | PC1_RS04925 | Not Available | Positive | 1135490 - 1136686 | 44962.3 |
| pectate lyase peli | PC1_RS04930 | Not Available | Negative | 1136790 - 1137845 | 37799.3 |
| glycoside hydrolase family 28 protein | PC1_RS04935 | Not Available | Positive | 1138548 - 1139756 | 42603.6 |
| hlyd family type i secretion periplasmic adaptor subunit | PC1_RS04940 | Not Available | Negative | 1140000 - 1141169 | 43473.4 |
| type i secretion system permease/atpase | PC1_RS04945 | Not Available | Negative | 1141180 - 1143318 | 78709.5 |
| tolc family outer membrane protein | PC1_RS04950 | Not Available | Negative | 1143358 - 1144785 | 52292.6 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
