Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-dicitrate abc transporter permease fecc | PC1_RS04855 | Not Available | Negative | 1122171 - 1123166 | 35176.3 |
| fe(3+) dicitrate abc transporter substrate-binding protein fecb | PC1_RS04860 | Not Available | Negative | 1123163 - 1124077 | 33437.1 |
| eal domain-containing protein | PC1_RS04865 | Not Available | Positive | 1124566 - 1126182 | 61068.9 |
| zinc ribbon domain-containing protein yjdm | PC1_RS04870 | Not Available | Positive | 1126303 - 1126644 | 12249.6 |
| lytic murein transglycosylase b | PC1_RS04875 | Not Available | Positive | 1126781 - 1127866 | 39895.3 |
| hypothetical protein | PC1_RS22470 | Not Available | Negative | 1128125 - 1128304 | 6386.04 |
| sulfite exporter taue/safe family protein | PC1_RS04885 | Not Available | Positive | 1128346 - 1129071 | 25538.7 |
| lysr family transcriptional regulator | PC1_RS04890 | Not Available | Negative | 1129068 - 1129961 | 32545.3 |
| ggdef domain-containing protein | PC1_RS04895 | Not Available | Negative | 1130042 - 1130749 | 26578.6 |
| duf1987 domain-containing protein | PC1_RS04900 | Not Available | Negative | 1130736 - 1131188 | 16999.8 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
